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Mak Scientists Unveil New Method of Measuring Stress Levels in Plants

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Just like animals and human beings, plants too can be stressed. Whereas one may easily detect stress in animals and humans basing on their behavior, plant “behavior” is not easy to interpret.  

Why should we be concerned about stress in plants?

Plants under stress cannot reproduce or grow well because they have to divert much of their physiological energy to fighting stress. If the plants are critical food crops, this will lead to perpetual food shortages because their energy resources are spent fighting stress.

New study on measuring stress in plants

A new study titled “Sandwich Enzyme-Linked Immunosorbent Assay for Quantification of Callose” and led by a team of scientists at the Department of Plant Sciences, Microbiology and Biotechnology at Makerere University in collaboration with the University of California, Davis, USA, shows how stress in plants can be measured. According to Prof. Arthur Tugume, the lead scientist of this study and expert in plant diseases, when plants are stressed, they produce numerous molecules within their cells mostly as means of adapting to stress or avoiding the impact of stress. “For example, plants produce reactive oxygen species like hydrogen peroxide, superoxide ions, and hydroxyl ions. These reactive oxygen species are produced rapidly and act as rapid messengers in the plant tissues to activate additional responses spreading over the entire plant body. This helps the plant to withstand or avoid the impact of stress”.

Some of the plants used in the study to design a new method of measuring stress as induced by the bacterium Xanthomonas campestris pv. Musacearum The plants in plate (A) are before infecting them with the bacterium, while in plant (B) are the same plants 14 days after infecting them with the bacterium. Photos by Mr. Abubakar S. Mustafa.
Some of the plants used in the study to design a new method of measuring stress as induced by the bacterium Xanthomonas campestris pv. Musacearum The plants in plate (A) are before infecting them with the bacterium, while in plant (B) are the same plants 14 days after infecting them with the bacterium. Photos by Mr. Abubakar S. Mustafa.

Dr. Ssenku E. Jamilu, a plant physiology expert on the team explains that in plants, stress can be induced by many factors such as pollution in the soil and atmosphere, high soil salinity (salt stress), excessive lack of water (drought), extreme temperatures, lack of oxygen (anoxia), excess radiation, mechanical injury by wounding or by pests that feed on the plants, and infestation by disease-causing microorganisms (pathogens). “Such factors are worsened by climate change, implying the importance of measuring their impact on individual plants to guide plant breeding programmes to ensure sustainable food production in the face of climate change”.

The research indicates that reactive oxygen species set in motion additional processes to ensure limited impact of stress on the plant. For example, a unique carbohydrate, named “callose” starts to accumulate in large quantities within plant cells as a means of fortifying plant cells. Callose differs from the other usual plant carbohydrates such as starch or cellulose because of the way its structures are formed. Also, the production of callose gets increased during stress. Callose acts as a road-block to any pathogen such as bacteria by limiting bacterial movement that would otherwise ease attack on other tissues or cells.

 “If we can artificially induce the stress on the plant, and then measure the amount of reactive oxygen species or callose or any other responses in the plant, we should be able to directly and quantitatively measure the stress,” Prof. Tugume explains.

He however notes that callose participates in many other normal developmental processes of plants and for that reason, there is always some “housekeeping” callose in the plant tissues even without stress. “This means that one must be able to accurately and quantitatively distinguish between ‘stress-induced’ and normal ‘housekeeping’ callose”.

In this study, the researchers used young (2.5-months old) banana plantlets that had been generated from tissue culture at Kawanda Agricultural Research Institute. They then infected the plantlets with a bacterium called Xanthomonas campestris pv. musacearum. This bacterium induces so much stress on the banana plants resulting into a destructive disease known as banana xanthomonas wilt (BXW), the most destructive disease of bananas in East and Central Africa.

The banana leaves, pseudostems and corms were analyzed for callose and compared with the control plants that had been inoculated with water instead of bacteria. The analysis was done using a method called S-ELISA (Sandwich Enzyme-linked immunosorbent Assay), that was designed by scientists in this study. This method is specific to callose.

Callose-specific primary antibodies were used to coat the wells of 96-well microplates followed by incubation with callose extracts from tissues of stressed plants. Additional incubation with same primary callose-specific antibodies was done, and finally, incubation with a secondary antibody that is conjugated to an enzyme. When a substrate is supplied to the enzyme, colour changes were monitored. The presence of callose (and thus stress on the plants) was assessed quantitatively by measuring the intensity of color change resulting from enzymatic action on the substrate. This method proved effective in comparison to the gold standard method of detecting and quantifying aniline blue stained callose using fluorescence microscopy.

This research was part of the PhD studies for Mr. Abubakar S. Mustafa at Makerere University and University of California, Davis. According to Mr. Mustafa, his method is new and can be applied to any plant that is subjected to any stress because generally, plants produce callose in response to stress.” Mr. Mustafa further states that the method is convenient because, if necessary, samples can be processed between a few hours to one year (or even longer), which allows exchange of materials between laboratories and countries when needed, something that was not possible before. The S-ELISA method used 96-well plates which allows high throughout studies, hence, hundreds of samples can be analyzed simultaneously within a few days.

This study has been published as a Protocol by Multidisciplinary Publishing Institute (MDPI) in an open access journal, “Methods and Protocols”, in the section: Biochemical and Chemical Analysis & Synthesis and is freely accessible on https://www.mdpi.com/2409-9279/5/4/54/htm.

The research was funded by the Bill and Melinda Gates Foundation through the National Agricultural Research Organization (NARO), Uganda. The project had partners including the International Institute of Tropical Agriculture, the Alliance for Bioversity International and International Centre for Tropical Agriculture (CIAT) and CABI.

For more details, contact;

  1. Prof. Arthur Tugume, Lead Scientist of the study, College of Natural Sciences, Makerere University, Email: arthur.tugume@mak.ac.ug, Tel: +256772514841
  2. Mr. Abubakar S. Mustafa, Co-Author and PhD student on the study, Email: mustafa.abubakar.sadik@gmail.com, Tel: +256702813233
  3. Hasifa Kabejja, Principal Communication Officer, College of Natural Sciences, Makerere University, Email: pr.cns@mak.ac.ug, Tel: +256774904211

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Natural Sciences

CoNAS Annual Report 2023

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Cover page of the CoNAS Annual Report 2023. College of Natural Sciences, Makerere University, Kampala Uganda, East Africa.

The College of Natural Sciences (CoNAS) is one of the 10 constituent Colleges of Makerere University with over 2,000 students and 153 members of staff spread across 2 schools and seven departments namely: School of Physical Sciences (Physics, Chemistry, Mathematics, Geology and Petroleum Studies) and School Biosciences (Departments of Plant Sciences, Microbiology and Biotechnology; Department of Zoology, Entomology and Fisheries Sciences; and Department of Biochemistry and Sports Sciences). The College is the cradle of basic sciences at Makerere providing a foundation for all applied sciences offered at the University. This report is a presentation of the performance of the College in 2023.

Key highlights include performance of the College at the 74th graduation of Makerere University, the award of an Honorary Doctor of Science to Prof. Leif Abrahamsson for his contribution to the development of Mathematics in the East African region, the development of an E-Supervision Web Portal (https:/mastersresearch.ug/) to support the tracking of Masters Research supervision processes, the formation and operationalization of the Biology Society of Uganda (BioSU), support rendered towards the development of aquaculture in the country, the development of five high-value nutritious products (baby food, sauce, maize meal, snacks, and seasoning) using Mukene through the NutriFish Project, the development of an application for tracking fish catches as a measure to prevent overfishing, development of solar tent driers – greenhouse-like structures that reduce the risk of contamination – provide clean and efficient storage and drying, especially during the wet season subsequently reducing post-harvest losses, equipping students and members of the general public with skills needed in the installation and maintenance of solar energy Photovoltaic systems and biogas plants, the Joint African- Nordic Conference in Mathematics, as well as the 2023 Eastern Africa Algebra Research Group and Women in Sage workshops. The report also highlights the research grants received in the course of the year, conferences held, community engagements, activities by students, awards received by the different members of staff, staff publications, and matters of Human Resources at the College.

Management conveys appreciation to all development partners and the Government of Uganda for the support extended towards the different projects at the College. We also thank the University Council and Management for creating a conducive environment for both staff and students to explore their full potential.

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Natural Sciences

Equipping Students with Bioprospecting and Product Development Skills

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Dr. Alice Nabatanzi, Lecturer, Department of Plant Sciences, Microbiology and Biotechnology, School of Biosciences, College of Natural Sciences (CoNAS), Makerere University, Kampala Uganda.

By Dr. Alice Nabatanzi

As we train Scientists we ought to equip them with skills that will help them survive beyond the Laboratories, beyond University, and beyond Academia. Thus, the need to Bioprospect and acquire product development skills.

I am therefore proud of what my 2024 Biotechnology Product Development Class has been able to achieve.

Following bioprospecting and entrepreneurial training, students developed the following products: Exotic beard oil, Herbal cough mixture, Power candy, Laundry bar soap, Moringa snack bars, Prudy Organic hair dye, Hair food, Syphilis remedy, Cornstarch based bioplastic, Nash probiotic drink, Dental care herbal mouthwash, Rosemary – lemongrass infused vinegar, Tea tree hand wash, Scented candles, Aloe fruit jam, Herbal bloom shower gel, Custard, Beetroot yoghurt, Dewormer, Stomach pain killers, Liquid organic fertilizers, Face scrub, Mosquito repellant scented air diffuser, Underarm whitening oil, Essential oil deodorant, Ria hair conditioner, Shower gels, Crochet jacket among others.

I am confident that with subsequent incubation, start-ups will emerge.


“The future belongs to those who learn more skills and combine them in creative ways.”

Robert Greene


“Build your skills not your resume.”

Sheryl Sandberg

Dr. Alice Nabatanzi is a Lecturer of Phytomedicine and Nutraceuticals in the Department of Plant Sciences, Microbiology and Biotechnology, School of Bio-sciences, College of Natural Sciences (CoNAS), Makerere University.

Photo Gallery of some of the products

Pata Guard Herbal Dewormer. Products from Dr. Alice Nabatanzi's 2024 Biotechnology Product Development Class, Department of Plant Sciences, Microbiology and Biotechnology, School of Bio-sciences, College of Natural Sciences (CoNAS), Makerere University, Kampala Uganda, East Africa.
Pata Guard Herbal Dewormer.
Lemongrass-Rosemary Infused Vinegar. Products from Dr. Alice Nabatanzi's 2024 Biotechnology Product Development Class, Department of Plant Sciences, Microbiology and Biotechnology, School of Bio-sciences, College of Natural Sciences (CoNAS), Makerere University, Kampala Uganda, East Africa.
Lemongrass-Rosemary Infused Vinegar.
Avocorn. Products from Dr. Alice Nabatanzi's 2024 Biotechnology Product Development Class, Department of Plant Sciences, Microbiology and Biotechnology, School of Bio-sciences, College of Natural Sciences (CoNAS), Makerere University, Kampala Uganda, East Africa.
Avocorn.
Jackfruit Seed Juice. Products from Dr. Alice Nabatanzi's 2024 Biotechnology Product Development Class, Department of Plant Sciences, Microbiology and Biotechnology, School of Bio-sciences, College of Natural Sciences (CoNAS), Makerere University, Kampala Uganda, East Africa.
Jackfruit Seed Juice.
Pure Mint Mouthwash. Products from Dr. Alice Nabatanzi's 2024 Biotechnology Product Development Class, Department of Plant Sciences, Microbiology and Biotechnology, School of Bio-sciences, College of Natural Sciences (CoNAS), Makerere University, Kampala Uganda, East Africa.
Pure Mint Mouthwash.
Exotic Beard Oil. Products from Dr. Alice Nabatanzi's 2024 Biotechnology Product Development Class, Department of Plant Sciences, Microbiology and Biotechnology, School of Bio-sciences, College of Natural Sciences (CoNAS), Makerere University, Kampala Uganda, East Africa.
Exotic Beard Oil.
Crochet Jacket. Products from Dr. Alice Nabatanzi's 2024 Biotechnology Product Development Class, Department of Plant Sciences, Microbiology and Biotechnology, School of Bio-sciences, College of Natural Sciences (CoNAS), Makerere University, Kampala Uganda, East Africa.
Crochet Jacket.
AvoGlow. Products from Dr. Alice Nabatanzi's 2024 Biotechnology Product Development Class, Department of Plant Sciences, Microbiology and Biotechnology, School of Bio-sciences, College of Natural Sciences (CoNAS), Makerere University, Kampala Uganda, East Africa.
AvoGlow.
Luxe Guard Scented Candles. Products from Dr. Alice Nabatanzi's 2024 Biotechnology Product Development Class, Department of Plant Sciences, Microbiology and Biotechnology, School of Bio-sciences, College of Natural Sciences (CoNAS), Makerere University, Kampala Uganda, East Africa.
Luxe Guard Scented Candles.
Moringa Snack Bar. Products from Dr. Alice Nabatanzi's 2024 Biotechnology Product Development Class, Department of Plant Sciences, Microbiology and Biotechnology, School of Bio-sciences, College of Natural Sciences (CoNAS), Makerere University, Kampala Uganda, East Africa.
Moringa Snack Bar.
Power Candy. Products from Dr. Alice Nabatanzi's 2024 Biotechnology Product Development Class, Department of Plant Sciences, Microbiology and Biotechnology, School of Bio-sciences, College of Natural Sciences (CoNAS), Makerere University, Kampala Uganda, East Africa.
Power Candy.

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Natural Sciences

15 PhD Positions: Human River Systems in the 21st century

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15 New Positions Open in the FWF PhD Program "Human River systems in the 21st century (HR21)". Application Deadline: 2nd April 2024. Austria. Europe

Highly qualified applicants from all over the world are invited to apply for the PhD Program “Human River systems in the 21st century (HR21)”. The 15 positions are fully funded and the Doctoral Programme is providing additional resources for conference presentations, retreats etc.

The 15 PhD research topics are:

  • Topic 1: Role of hydrological extremes (floods) for sediment transport and morphodynamics in the human-river system
  • Topic 2: Material resources demand and flows of hydraulic structures to prevent societal impact of extreme events (social ecology, environmental history)
  • Topic 3: Intermittent flow – hydrological effects and impacts on benthic communities, ecological state and functioning of riverine systems
  • Topic 4: Drought, low flow and warming – hydrological effects and impacts on the ecological state and functioning of river systems
  • Topic 5: Water transit time distributions as indicators for the vulnerability of riverine ecosystems under different pressures from social metabolism
  • Topic 6: Analyzing possible contributions of re-activated former watercourses towards a more sustainable transformation of industrialized riverine landscapes in urban areas
  • Topic 7: The role of the latest industrial revolutions on instream processes and ecological vulnerability of IRL
  • Topic 8: The effects of infrastructure development on ecological and ecosystem service network properties in river systems
  • Topic 9: The impact of urban settlements on organic matter and nutrient flows in industrialized riverine landscapes – What can we learn from the past?
  • Topic 10: Urban metabolism, a river’s ecohydrology and industrialization: Vienna and the Danube, 1800-2000
  • Topic 11: Impact of external organic matter sources on nutrient, sediment and water transport from cropland into streams
  • Topic 12: Impacts of bioenergy crops used as riparian buffer strips on stream ecosystems’ functioning
  • Topic 13: Sustainable hydropower & and the water-energy-food nexus in multi-stressed IRLs: Challenges and solutions for science & management
  • Topic 14: Integrated modelling of farmers’ climate change impact and adaptation appraisal to inform regional human river nexus management
  • Topic 15: Strategic planning approaches to territorial governance of industrialized riverine landscapes

For more information, please visit: https://short.boku.ac.at/q9ry2k

Application deadline: 2nd April 2024

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