Agriculture & Environment
Mak-CAES Hosts Hybrid Seminar on Finding the Best Cattle Genetics for Africa (OPTIBOV project)
Published
3 years agoon

OPTIBOV: Genetic Characterization of Cattle Populations for Optimal Performance in Africa Eco Systems
A large variety of local indigenous and commercial cattle breeds has been produced as a result of domestication and selection. This variety ensures the capability and adaptability of livestock to fulfil its role in food production under different circumstances, now and in the future. Local breeds exhibit unique adaptive features to harsh environments, which can be useful for adjusting mainstream breeds to climate change. Simply transferring high producing commercial animals to the African continent, will not be the solution due to low performance and even low survival under these harsh environments (ecosystems). The aim of the OPTIBOV project is to improve production and survival of traditional/indigenous breeds adapted to the local environments in Africa. This will secure the future of these well adapted traditional/indigenous local breeds.With combined effort from partners across the globe, the OPTIBOV project will help maintain traditional cattle breeds, capture adaptation, use known variations in production, train, educate & involve stakeholders to perform optimal breeding.

The project is coordinated in The Netherlands (Wageningen University and Research Centre). Participating institutions include; Makerere University, Uganda; Natural Resources Institute Finland; Agricultural Research Council Pretoria, South-Africa; University of Porto, Portugal; Cairo University, Egypt; and Taurus Foundation Netherlands.
Project members include; Dr. Richard Crooijmans, Wageningen University, The Netherlands; Dr. Donald Kugonza, Department of Agricultural Production, Makerere University; Prof. Juha Kantanen, Natural Resources Institute Finland; Dr. Nasser Ghanem, University of Cairo, Egypt; Dr. Linky Makgahlela, Pretoria, South Africa; and Dr. Catarina Ginja from Portugal.
The project is supported by LEAP-Agri, a joint Europe Africa Research and Innovation (R&I) initiative related to Food and Nutrition Security and Sustainable Agriculture (FNSSA).
An important deliverable of the project is a new genotyping assay specific for African cattle breeds which will include markers associated with specific traits.

Expected outcomes and impact:
- A uniform bovine phenotype scoring list for adaptation traits.
- Genome-wide information of the traditional breeds. Giving knowledge on the amount of diversity but also on the amount of inbreeding, detection of potential genetic defects and selective sweeps related to adaptation to a specific environment.
- The obtained information can be used to improve traits by selection of animals within or over breeds such as longevity, production and resistance to diseases. This will increase production, longevity and reduces cost for medical treatments which will result in breed performance in the next generations.
- Training of young researchers will be conducted to use the latest technology and techniques and how to implement the findings in breeding.
- Involvement of all stakeholders up to farmers by creating an APP, database and website to submit data and actively participate within the research.
Hybrid seminar
On 25th April 2022, the project team met at the College of Agricultural and Environmental Sciences (CAES), Makerere University to share updates on activities in the respective countries. The hybrid seminar was hosted by Dr Donald Kugonza and Dr Morris Agaba.

Seminar presentations/issues being researched
- Traditional cattle genomics: search for adaptive markers–Dr Richard crooijmans, Wageningen University in The Netherlands;
- Developments in SNP genotyping and next generation sequencing in South African indigenous cattle – Dr AA Zwane, a Researcher in Animal Breeding and Genetics, Agricultural Research Council-Animal Production (ARC-AP), Irene, Pretoria, South Africa;
- Molecular responses of heat stress during early embryonic development and alleviation strategies– Dr Nasser Ghanem from the Department of Animal Production, Faculty of Agriculture, Cairo University, Egypt;
- Application of genomics for livestock genetic improvement–Dr Linky Makgahlela, ARC-Animal Production, South Africa;
- Genomic characterization of northern native cattle breeds-Prof.JuhaKantanen, Natural Resources Institute Finland;
- Phenotypic and Genotypic Characterisation of Ankole, Ntuku and Nganda cattle of Uganda-Dr.Behabura Generous Betunga, an MSc. Animal Science student in the Department of Agricultural Production, CAES;
- Investigating the production and adaptive traits of indigenous cattle to eastern Uganda ecosystems-Waibi Sarah, an MSc. Livestock Development student at the College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University;
- The use of Genomic Tools to Improve Cattle, an Archaeogenomics Perspective– Dr Catarina Ginja

Issues arising from the research
1. Developments in SNP genotyping and next generation sequencing in South African indigenous cattle – Dr. A. A. Zwane
There is notable difference in using single nucleotide polymorphism (SNP) data and whole genome sequence (WGS) data in characterizing SA indigenous cattle breeds
WGS data holds the potential for the improvement of indigenous livestock breeds due to the in-depth analysis genome-wide
Genetic diversity studies give the understanding of population structure, demographic history, introgression and heterozygosity levels in South Africa indigenous cattle
Identification of selective signatures provides insight into selection events that have shaped the genomes of indigenous cattle breeds, and allows the identification of important genes
This will allow genomic selection, sooner, in the indigenous breeds, and more studies are needed for other indigenous livestock species
2. Application of genomics for livestock genetic improvement – Linky Makgahlela, ARC-Animal Production, South Africa
- Genomics drives biological efficiency of production, boosts livestock contribution for sustainable protein source
- Genomics promises cutting-edge solutions: Nutritional needs of all human beings, while safeguarding natural resources, and preventing environmental degradation
- Genomics enables farmers to increase efficiency, decrease production costs & prophylactics and limits expenditure of resources
- Research (and capacity development) ongoing for better understanding of breeds and to put science to practice

3. Genomic characterization of northern native cattle breeds – Prof. Juha Kantanen, Natural Resources Institute Finland
The gene expression analysis of the northern Eurasian breeds revealed;
- Several differentially expressed genes (DEG) that were associated with the eicosanoid metabolic process (ALOX15, ALOX5 and HPGD) in northern Finncattle and with immunity (CCL4, CCL5 CX3CR1, CXCR6 and PRF1) and the regulation of lipid transport (ABCA1, ABCG1, IRS2 and THBS1) in Yakutian cattle.
- The genes involved in the immune system are also associated with environmental adaptation.
- The eicosanoid metabolic process was previously found to be involved in the hibernation of brown bears (Ursusarctos) and indigenous peoples associated with seasonal changes. These findings indicate a convergent evolution that may have occurred in different mammalian species living in northern and sub‐arctic environments.
4. Phenotypic and Genotypic Characterisation of Ankole, Ntuku and Nganda cattle of Uganda – Dr. Behabura Generous Betunga, Makerere University
The Ugandan cattle herd is comprised of 93.3 percent of indigenous breeds and their crossbreeds which are mainly; Long-horned cattle of Uganda (Sanga) (Bostaurusindicus); Zenga breeds (Sanga and Zebu crosses); East African short-horn Zebu (Bosindicus). The OPTIBOV breeds of interest in Uganda are; Long horned Ankole cattle (South-Western Uganda); Nganda cattle (Central-Uganda) and Ntuku cattle (Mid-Western Uganda). The study aims to carry out phenotypic characterization for performance traits and draw a genomic growth curve for Ankole, Ntuku and Nganda cattle under different management systems for a period of 0 to 18 months in Uganda. It also aims to carry out genetic characterization and measure the genetic relationship between the Ankole, Ntuku and Nganda cattle in Uganda; and to assess selection techniques (natural and human mediated) of Ankole, Ntuku and Nganda cattle of Uganda. Meetings have been held with farmers and animals selected for sampling and samples collected for analysis.


Issues arising include;
- The Indigenous cattle breeds are at the threat of genetic erosion. There is need for Phenotypic & genotypic Characterization for the performance traits of the Ankole, Ntuku and Nganda
5. Investigating the production and adaptive traits of indigenous cattle to eastern Uganda ecosystems
Cattle is a valuable source of income, employment & a major source of nutrition to people in the East especially Karamoja and Bukedi in Tororo. Angoria Ting and Cheptoyoi are the indigenous cattle breeds in Karamoja: Karamajong women prefer rearing goats to cows. The study aims to;
- To phenotypically characterize the performance and adaptive traits of the Nkedi and Karimajong cattle
- To develop indices for assessing the productivity of the Nkedi and Karimajong cattle
- To assess status and risk of erosion of the two indigenous cattle genetic resources
Meeting with Makerere University Vice Chancellor
In the course of the seminar, the OPTIBOV project team paid a courtesy call on Makerere University Vice Chancellor, Prof. Barnabas Nawangwe who congratulated them upon winning the research grant.“As we celebrate 100 years of teaching, research and innovation, such projects are vital in pushing forward our agenda of transforming Makerere into a research-led University,” he noted, pledging to accord the researchers all the support they need to achieve the project objectives.
The project leader at Makerere University, Dr. Donald Kugonza expressed gratitude to the Vice Chancellor for the support he accorded the team in their bid for the project.
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Agriculture & Environment
Call for Grants to Develop Policy Briefs and Working Papers on Climate-Resilient Agri-Food Systems
Published
3 days agoon
October 6, 2025By
Mak Editor
The Regional Universities Forum for Capacity Building in Agriculture (RUFORUM), in close collaboration with the Alliance for a Green Revolution in Africa (AGRA), recognizes the vital role of young researchers in shaping Africa’s future. Graduate students, in particular, bring fresh perspectives, innovative ideas, and rigorous research to the climate and agriculture discourse. Yet, much of this knowledge remains locked in academic theses and journal articles, with limited translation into policy and practice spaces where it can have the greatest impact. To bridge this gap, RUFORUM & AGRA are launching a grant opportunity for graduate students
(Master and PhD Candidates & Post-Doctoral Fellows) enrolled in African universities to develop policy briefs and/or working papers on strengthening climate-resilient agri-food systems. This initiative is designed to support students not only to generate high-quality academic outputs but also to translate their findings into actionable recommendations for policymakers, practitioners, and other stakeholders.
The program will provide educational, skilling, and incubation opportunities, preparing young people; especially young women for the world of work. It will also enhance access to market-relevant training and practical skilling opportunities, enabling youth to gain the competencies needed by the labor market for both self-employment and wage employment. Through this call, RUFORUM & AGRA seeks to empower a new generation of African scholars to contribute directly to national, regional, and continental dialogues on climate change, resilience, and sustainable agri-food systems.
APPLICATION PROCESS
- Applicants must submit an abstract of no more than 500 words through the RUFORUM online application portal (https://rims2.ruforum.org/)
o Instructions for submission can be accessed on this link - Inquiries: cgs[@]ruforum.org
- RUFORUM reserves the right to make final award decisions.
IMPORTANT DATES
Call Opens: September 5, 2025
- Deadline for Abstract Submission: October 15, 2025
- Notification of Selected Abstracts: October 30, 2025
- Submission of Final Policy Brief/Working Paper: December 31, 2025
Agriculture & Environment
Mak Hosts TORCH Project Training Workshop on Clean Energy & Green Growth
Published
1 week agoon
October 2, 2025
Written by Matila Tom Micah
Makerere University on 1st September 2025 held a training and retooling workshop for stakeholders under the TORCH Project. TORCH is a collaborative initiative between Makerere University, the University of Natural Resources and Life Sciences-BOKU, Kyambogo University, Kabale University, University of Juba, and Busitema University. Funded by the OeAD-GmbH under the Austrian Partnership Programme in Higher Education Research for Development (APPEAR), the project seeks to strengthen cooperation between academia and local communities to promote green growth and environmental sustainability. The project aims to promote academic-community partnerships through living labs, training, research, and outreach.
The workshop, held under the theme “Towards a Clean Energy and Zero-Emission Society in East Africa: Strengthening Academic and Community Collaborations in Outreach, Training, and Research in Green Growth and a Healthy Environment”, brought together academics, students, policymakers, and community leaders. Together, they explored strategies for green growth, climate resilience, and sustainable development.
Dr. Patrick Musinguzi, TORCH’s Principal Investigator, opened the event with an overview of the project, explaining key concepts such as green growth and the innovative Living Labs approach. He underscored the urgent need for African universities to lead the charge in green growth, a development model balancing economic progress with natural resource conservation and reduced greenhouse gas emissions.
While the country has adopted the Uganda Green Growth Development Strategy, Dr. Musinguzi pointed out that universities have yet to fully integrate green growth principles into curricula, research, and community engagement. TORCH aims to bridge this gap by establishing three Living Labs in the Central, South-western, and Eastern regions of Uganda, focusing on enhancing teaching, community-driven research, and policy development.
Green Growth
In his presentation, Dr. Musinguzi emphasized the importance of adopting green growth as Uganda’s path to development. He described green growth as “environmentally sustainable economic progress that encourages low-carbon, socially inclusive development.” “Green growth is not merely about environmental protection – it is about creating a future where economic prosperity, social equity, and environmental sustainability coexist,” he explained.

Why Green Growth matters for Uganda
With Uganda’s rapidly growing population placing immense pressure on land, food, and energy resources, Dr. Musinguzi pointed out that per capita land ownership had significantly decreased, while climate change impacts such as floods, prolonged droughts, and erratic rainfall continue to threaten food security.
He stressed that pursuing green growth offers Uganda multiple benefits:
- For farmers, it ensures resilience to climate shocks, better yields, and access to innovations like solar irrigation and biogas.
- For the youth, it opens up new job opportunities in renewable energy, waste management, and eco-friendly enterprises.
- For policymakers, it aligns development plans with environmental sustainability while attracting green investments.
- For households, it reduces energy costs, improves health, and enhances overall well-being.
Uganda’s policy commitments
The workshop highlighted national frameworks already in place to support green growth, including the National Environment Act (2019), the Climate Change Act (2021), and the Uganda Green Growth Development Strategy (2017–2030). These policies, coupled with Uganda’s Vision 2040, set a clear direction for a low-carbon and climate-resilient economy.
Green technologies being piloted under the TORCH Project
During the workshop, Dr. Musinguzi showcased several practical innovations being piloted under the TORCH Project. These include:
- Solar home systems that cut fuel demand by up to 25%.
- Rainwater harvesting tanks that save 20,000–50,000 litres of water per household annually.
- Improved cook-stoves that reduce indoor air pollution and fuel consumption.
- Drip irrigation systems that minimize water loss by up to 60%.
- Biogas systems that convert organic waste into clean energy for households.
Despite these advances, uptake remains low. A 2024 UBOS report revealed that only 3% of Ugandan households currently use clean cooking fuels and technologies, way below international clean energy adoption targets.
The importance of Academia-community engagement in promoting green growth
The training emphasized the need for universities to serve as “living laboratories” for green innovations. Makerere University, through the TORCH Project, is integrating green growth concepts into its curricula, running pilot projects in communities, and training the next generation of sustainability leaders. “We are committed to bridging the gap between academic research and community transformation,” Dr. Musinguzi said. “Green growth must not remain in lecture halls, it has to be felt in farms, households, and cities across Uganda.”
Participants agreed that scaling up green growth is not just a policy ambition, but a national necessity. “With the right investments, awareness, and community involvement, Uganda can transition towards a zero-emission, climate-smart, and inclusive economy by 2040.”

Insights from Participants
- Dr James Wasike Mangeni from the Department of Sociology and Anthropology at Makerere University highlighted the need to rebuild social structures and foster responsible use of resources within the university, calling on leadership to reinforce environmental management and nurture respectful behaviours among students.
- Dr. Isaac Newton Alou from the Department of Soil Science and Land Use Management at Makerere University praised the green growth and Living Labs concepts, urging incorporation of sustainability into infrastructure projects like green and solar rooftops, and enhancing student-led data collection for impact assessment.
- Dr. Anthony Mwije from the Department of Crop Science and Horticulture, Makerere University stressed that green growth starts with personal discipline and should be embedded in university operations, including procurement and transport. He advocated for infrastructure supporting sustainable lifestyles, such as bicycle-friendly roads and reliable public transit.
- Dr. Olupot Giregon, Head, Department of Soil Science and Land Use Management at Makerere University raised concerns about the equitable distribution of green growth costs, especially for smallholder farmers, emphasizing stewardship and the importance of making green growth meaningful from curricula to end-users.

Living Labs: Innovation at community level
In rural Uganda, smoky cooking fires pose serious health risks for many families. The TORCH Project is tackling this issue by transforming households from passive energy users into active innovators, building a cleaner, healthier future.
At the heart of this initiative are Living Labs – community hubs where academia, industry, policymakers, and local residents collaborate to develop and test practical green technologies. These include biogas digesters that turn animal waste into clean fuel, solar power systems replacing hazardous kerosene lamps, energy-efficient stoves, and rainwater harvesting solutions.

“Living Labs empower communities, especially women, who face the greatest energy challenges, to lead sustainable transitions,” said Dr. Musinguzi. “Students also work directly with villages, gaining hands-on experience in addressing Africa’s energy needs. A significant advantage is linking these efforts to carbon credits, enabling families to generate income by reducing emissions and turning climate action into economic opportunity.”
The TORCH Project plans to expand Living Labs throughout East Africa, supported by digital tools to accelerate clean energy adoption, climate action, and poverty alleviation. More than just projects, these Labs foster community pride and position local residents as innovators in the fight against climate change.
Agriculture & Environment
Uganda Urged to Strengthen Extension Services to Realize Climate Smart Agriculture Goals
Published
2 weeks agoon
September 25, 2025By
Jane Anyango
Fort Portal, Uganda
Uganda’s progress toward Climate Smart Agriculture (CSA) will remain limited unless deliberate efforts are made to strengthen agricultural extension services and turn policy intentions into real impact for farmers.
This was the key message delivered at a high-level policy dialogue held in Fort Portal, which brought together over 30 district officials, researchers, and policymakers from 11 districts across the Bunyoro and Rwenzori sub-regions.
The dialogue, held at Night Rose Hotel, was organized by the Environment for Development (EfD)–Mak Centre, under Makerere University, coordinated by the EfD Global Hub at the University of Gothenburg Sweden, funded by the Swedish International Development Cooperation Agency (Sida). The event aimed to deepen local understanding of CSA and strengthen connections between policy frameworks and implementation at the grassroots.
In his welcome remarks, Baguma Brian James, Senior Fisheries Officer for Kabarole District, thanked the EfD team for bringing such a relevant discussion to the region. He described the event as a moment of professional and academic reflection, noting that many participants had been reawakened to concepts they once encountered in school.
“I’d like to thank you all for being part of these valuable engagements,” Baguma said. “As Kabarole District, we are actively participating in this project. Our farmers are progressing toward co-funding stages for input support.” He expressed hope that the dialogue would not only offer technical knowledge but also actionable strategies participants could take home and apply.

Representing the Director of EfD-Mak Centre, Dr. Nicholas Kilimani underscored the importance of science in guiding agricultural decisions. He reminded participants that the EfD Centre’s functions include research, outreach, and policy engagement – all of which converge in dialogues like this one.
“The theme of this dialogue Smart Agriculture resonates with Uganda’s urgent need to sustain its agricultural backbone amid mounting pressures from climate change and human activity,” Dr. Kilimani said. He emphasized that decision-making must be grounded in scientific evidence rather than conjecture, pointing out that agriculture, while essential to Uganda’s economy, continues to suffer under environmental degradation, poor planning, and the effects of climate variability.
“We are no longer in an era of trial and error. Decision-making must come from science, not hearsay,” he added. Kilimani also highlighted the power of global collaboration, noting that the EfD network spans six continents, creating a powerful exchange of knowledge to support sustainability around the world. “We are using these global synergies to contribute to a sustainable planet—of which we only have one.”

Fort Portal Deputy Resident City Commissioner, Busingye Emmanuel, officially opened the dialogue and welcomed participants to the city. He applauded the event’s focus on climate-smart agriculture but lamented the widespread failure to enforce environmental laws and coordinate government action effectively.
“Uganda is not short of laws or institutions to protect the environment. The problem is either poor coordination or outright inaction,” Busingye said. He cited the continued degradation of wetlands in Fort Portal as a key example of where environmental protection efforts fall short. While several government agencies exist to enforce these policies, their actions are often fragmented or undermined by personal and political interests.
“If we did what we are supposed to do, we wouldn’t have this level of environmental destruction,” he added. Busingye further urged participants not to treat the event as a box-ticking exercise but as a launching point for real implementation on the ground. “Let’s not attend workshops and stop there. Let us act on the ground.”
Presenting an overview of CSA, Dr. Peter Babyenda revealed sobering statistics about land use and degradation. He noted that agriculture accounts for 72% of Uganda’s land use and that 41% of this land is already degraded. If the current trend continues, by 2040, nearly 90% of Uganda’s land could be under agricultural use, intensifying environmental stress.

“Our natural forest cover once fell to 9%, though efforts to promote CSA have raised it to around 30%,” Dr. Babyenda explained. He warned, however, that only 30% of farmers in Uganda are currently practicing climate-smart techniques — a dangerously low figure given the urgency of climate change.
“CSA offers a triple win increased productivity, improved resilience, and mitigation of greenhouse gas emissions,” he said. “But adoption remains low due to costs, lack of awareness, and poor access to technologies.” Dr. Babyenda also highlighted the European Union’s upcoming regulatory requirements on deforestation-free coffee exports, warning that Uganda could lose access to lucrative markets if it fails to embrace CSA practices. “Without climate-smart agriculture, our exports will suffer,” he stated.
Dr. Florence Lwiza Nsereko delivered an evidence-based presentation on CSA case studies and emphasized the critical role of extension services in scaling CSA. She reiterated that agriculture, deforestation, and other land-use forms like livestock production remain Uganda’s largest contributors to greenhouse gas emissions. Yet despite an abundance of policy documents, actual implementation remains weak.

“Climate Smart Agriculture integrates productivity, adaptation, and mitigation. But its adoption remains low because our extension services lack capacity,” Dr. Lwiza said. She pointed to key barriers in extension delivery, including lack of access to training, weak institutional support, and poor perceptions about CSA among field officers. Notably, she revealed that female extension workers often outperform their male counterparts in CSA delivery.
She further noted that Western Uganda is both highly vulnerable to climate shocks and densely populated, making it a prime candidate for CSA interventions. “Western Uganda is both a climate risk hotspot and an opportunity zone. Now is the time to act,” she concluded.
Adding another layer to the discussion, Dr. Aisha Nanyiti presented research on the role of renewable energy micro, small, and medium enterprises (MSMEs) in transforming agriculture across Sub-Saharan Africa and Southeast Asia. She argued that clean energy and climate-smart practices must be pursued together to achieve inclusive, low-carbon growth.

“Agricultural modernization and climate goals can go hand in hand — if we remove barriers to clean energy,” she said. She stressed the importance of financial access, supportive regulations, and targeted capacity building to ensure that MSMEs can support CSA.
Closing the dialogue, Deputy Speaker of Fort Portal City, Tusiime Florence, expressed gratitude to the organizers but raised concerns over the sustainability of such engagements. She urged EfD-Mak and its partners to avoid the common trend of one-off workshops that do not translate into long-term support for local governments.

“Workshops come and go, but no one returns to follow up with our communities,” she said. Tusiime called attention to the overwhelming workload and underfunding of agricultural extension officers, many of whom use their own money and have no transport to reach rural areas. “Our extension workers are overworked and underfunded. They have no motorcycles, no transport,” she said. “Yet they are expected to implement national climate and agricultural goals.”
She called for continued support and follow-through from Makerere University and the EfD-Mak Centre. “When farmers dry maize on bare soil, it’s not ignorance – it’s lack of training and support,” she noted. “If you come back and work with us, we will make CSA work.”
The Fort Portal dialogue highlighted the growing urgency to transition from policy declarations to farmer-level action, as climate shocks continue to impact agricultural livelihoods. While Uganda has made strides in crafting climate and agriculture policies — including Nationally Determined Contributions (NDCs) and CSA frameworks — weak operationalization, limited financing, and poor coordination remain major obstacles. Stakeholders agreed that building capacity, particularly among extension workers, remains the single most effective route to scaling climate-smart agriculture and delivering tangible impact where it matters most — at the farm.
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