Computing & IS
Project PIs & Accountants Urged to follow Budget Controls, Approval Structures & Policies
Principal Investigators (PIs), research assistants and accountants in the College of Computing and Information Sciences (CoCIS) on 23rd November 2023 were equipped with knowledge and skills on Accountability protocols to increase their knowledge on managing funds.
The half-day blended Workshop which attracted 30 participants was officially opened by the Principal CoCIS, Prof. Tonny Oyana and facilitated by the Manager Accounts and Reports Makerere University Mr. Lubowa S. Gyaviira and the Team Leader, College of Agricultural and Environmental Sciences (CAES) Mr. Tom Vok Elwana.
The training highlighted the common accountability challenges, accountability procedures and approvals and submission of accountability reports.
Noting delays in accountabilities, Prof. Oyana said, he would like to see the college conduct research and grow big rather than being blacklisted by development partners and donors.
The Principal said, the college has established itself in four principle areas of research where it draws credibility namely; the Sensing Technology, Artificial Intelligence, Human Computer Interaction research and Information seeking research.
He observed that sometimes researchers under estimate the reasons to be financially knowledgeable and hence the need for the training.
“Everything happens because of money. If you are a poor manager of your money, then, you cannot pursue the activities you set. So, financial responsibilities and discipline are very important if you are to be a good negotiator”, He said.
Motivated by the need to build a system that is prudent and robust and building an inclusive place to learn, work and succeed, Prof. Oyana shared his experience of what he has learnt as critical.
“First of all, know your financial status and spend within those limits. Never destroy someone’s credibility. I also recommend responsible financial discipline and not to go by peer pressure.
The minute you indicate a budget, you have controls. You don not shift budget items from other controls. If you want to spend and move items that are 10% and above, you need to get permission from the treasury”, Oyana advised.
The Principal also advised researchers to learn and follow the approval structures and policies, stick to their values and ethics and, ensure funds are used for intended activities. He advised scientists to strive for excellence and make good returns to those that entrust them with the resources.
Prof. Oyana extended the call for discipline in the laboratories on grounds that laboratories run on ethics and honesty. He stressed that it is good practice to follow scientific evidence because Science does not depend on rumours but on data and evidence.
Oyana also urged every researcher to have a research gap, be visionary and ensure laboratories have good practices and procedures and, provide data and scientific evidence to back hypotheses.
He reminded researchers that the primary duty of research is contributing to the body of knowledge and secondly to train and mentor young scientists to contribute to their knowledge.
Accountability procedures and approvals
Giving an overview of Accountability procedures and approvals, Mr. Lubowa Gyaviira represented by Mr. Tom Elwana underscored the need for researchers to know the regulations for accountability when planning.
Key Accountability procedures as extracted from relevant laws, policies and procedures that govern public financial management include but not limited to; Public Finance Management Act 2015; Universities and Other Tertiary Institutions Act; Treasury Instructions 2017 and; Makerere University Financial Manual 2014.
Elwana said accountability helps to establish whether the funds advanced were used for the intended purpose and whether all documentation relating to the accountability was presented for review.
Section 10 paragraph 10.20.11 and 10.20.12 of the Treasury Instructions, 2017, requires all advances to be retired as soon as the necessity for their use ceases to exist or within sixty (60) days upon completion of the activity or by closure of business of the last working day of the financial year in which the advance was issued.
“The Makerere University Financial Procedures Manual 2014 under section 4.6.4 enjoins staff to account for all advances received within 14 days of the completion of the activity and in any case not later than 60 days.
Failure to comply with standing instructions leads to the withholding further advances; Recovery from payroll; and or Disciplinary action in accordance with laid down procedures”, he said.
Elwana explained that staff advanced funds should follow the accountability and approval process from the unit accountant to the Internal Audit/examinations and compliance office which delivers to the Secretary Directorate of Internal Audit, who shall ensure it is stamped received, recorded in the register.
He said, a report for accountability must be attached and receipts indicating clearly amount of advance being accounted for while outstanding advances at end of year will be posted to the general ledger to make up the funds balance.
“Balances on advances not utilized at the end of the work/research should be surrendered to the Head of accounts and a receipt should be issued.
Failure to submit accountability will necessitate refund of all unaccounted for funds by the implementer.
After clearance of all accounted funds, a Journal Voucher (JV) is issued to show clearance of total amount accounted for,” Elwana emphasized
Submission of projects to GAMSU, a MUST for implementation of any activity
Elwana told researchers that all project PIs must not only register their projects and budgets with the Makerere University Grant Administration, Management and Support Unit (GAMSU) but also submit quarterly reports to this unit.
“GAMSU has an application and is calling upon PIs to submit their projects for capturing in their data. Failure to be captured, they may not implement their activities”, Elwana warned
Makerere University established GAMSU, which is tasked with the responsibility of overseeing all projects and grants within the university. This measure, Elwana explained, was an agreement with Government to allow the university oversee and receive the grants instead of the funds going directly to the consolidated fund.
The key responsibility of GAMSU is to ensure that reporting is streamlined within the university. GAMSU requires quarterly accountability reports from all grants and projects.
Submission of all budgets by all projects and grants is also mandatory as part of the accountability reports required by the University and Government.
As a matter of emphasis, on submission of accountability reports, PIs were advised to pay attention to their MoUs since different funders have different requirements.
Detailed presentations from the training follow below.
Computing & IS
Prof. Engineer Bainomugisha Takes Over as Principal of CoCIS, Pledges Focus on Excellence, Research and Innovation
Prof. Engineer Bainomugisha has officially assumed office as Principal of Makerere University’s College of Computing and Information Sciences (CoCIS), pledging to work with staff, students and university management to strengthen academic excellence, research, innovation and the welfare of the college community.
Bainomugisha formally took over the leadership of the college during a handover ceremony held on the afternoon of September 10, 2026, in the Block A Conference Room, Level 4. He succeeds Prof. Tonny Oyana, while the immediate handover was conducted by Dr. Peter Nabende, who had served as Acting Principal for about one month.
The ceremony was moderated by CoCIS Principal Human Resource Officer Julius Lebo and attended by a representative from the Office of the Makerere University Chief Internal Auditor, heads of departments, deans, administrative and support staff, as well as student representatives.
Bainomugisha said he was honoured and privileged to serve as Principal, thanking the University Council, University Management, Senate and the Search Committee for entrusting him with the leadership of the college.
He said his appointment followed a competitive selection process involving the Search Committee, Senate, the Appointments Board and ultimately the University Council.
“I would like to thank the University Council, the University Management, Senate, and the Search Committee for giving me the opportunity to serve as a College Principal,” Bainomugisha said.
He also expressed appreciation to Vice-Chancellor and other university officials for accommodating his participation in the selection process, including allowing him to make his Senate presentation online while he was travelling.
Four priorities for CoCIS
In outlining his vision, Bainomugisha said he wants CoCIS to build a strong reputation around four key areas.
First, he said the college should be recognised for producing graduates who demonstrate excellence, with teaching and learning aligned to Makerere University’s strategic plan.
Second, he said CoCIS should become globally recognised for undertaking impactful research.
Third, he identified innovation and technology transfer as another priority, stressing the need for innovations developed at the university to move beyond academic settings and create wider societal impact.
Finally, he pledged to promote a conducive working and learning environment for both staff and students, underpinned by teamwork.
“I would like to see a College that is known to produce graduates who are really excellent,” he said. “I would like to see a College that is globally recognised to undertake impactful research. And I would like to see a College that is also known for innovations and technology transfer.”
He added that the college should also be “a conducive work environment for staff and students, as well as teamwork.”
Bainomugisha called for collective responsibility in achieving the priorities, saying the Principal’s office would work with academic and administrative units, students, University Management, Council and other stakeholders.
He acknowledged that the college faces several challenges, but said these would have to be tackled progressively.
“There are many challenges that the outgoing principal has outlined, and I believe that we can work together to address some of those challenges,” he said. “Obviously, we’ll address one challenge at a time. We cannot promise that we’ll address all of them on day one.”
Nabende hands over college with staffing and programme challenges highlighted
In his handover report, Dr. Peter Nabende provided an overview of the college’s academic programmes, staffing situation, research and innovation activities, budget, committees, grants and other administrative matters.
Nabende said he had sought to build on the handover report prepared by the former Principal, Prof. Tony Oyana, while incorporating developments from his one-month period as Acting Principal.
He said his report was structured around the responsibilities assigned to him, including implementing university policies and regulations, overseeing academic programmes, promoting research and innovation, coordinating the college budget, managing units and committees, mobilising resources and research grants, and providing progress reports to university management.
Nabende said no legal cases had arisen during his brief tenure, noting that he had sought to operate within university policy and regulatory frameworks.
He also provided an overview of CoCIS academic programmes, noting that accreditation and curriculum review remain important issues for the college as the university moves toward competence-based education and training.
According to Nabende, a number of programmes remain active and accredited, while others are under review or being proposed. He noted that the college must prepare for the implementation of the competence-based education and training framework, which institutions are expected to comply with by 2027/2028.
“This is a critical item that will concern the college for the coming one year,” he said, urging the college to strategise to meet the requirements.
Staffing shortage raises concern
One of the major challenges highlighted in the handover was staffing.
Nabende said the college is operating a growing number of academic programmes while facing limited staffing capacity. He warned that increasing student enrolment, combined with staff shortages, could put pressure on the quality and effective delivery of academic programmes.
He also raised concern about the increasing attrition of staff, saying several employees had recently left the university, including some who had recently obtained PhDs.
“We have increasing attrition rate. We have a number of colleagues who are leaving,” he said, describing the trend as concerning because the college can find itself replacing staff at roughly the same rate as those leaving.
He said the university and college leadership need to find ways of addressing the staff exodus.
Nabende also reported that Jinja Campus remains severely understaffed and said the college continues to support some of its programmes through staffing arrangements involving CoCIS departments.
He further pointed to administrative staffing gaps, saying the workload generated by the college’s growing numbers of programmes and activities affects productivity, output, quality and responsiveness.
Research and innovation on the rise
Nabende said CoCIS has experienced increasing research activity and output in recent years and urged the college to build on that growth.
He cited a number of research and innovation initiatives, including the Ocular project, AIRCOR and work involving natural-language technologies, speech recognition, artificial intelligence applications in mental health, agriculture, livestock health and education.
He said the college’s innovations had also attracted recognition from government officials, citing a recent visit by the Minister responsible for Science, Technology and Innovation.
The college currently has 24 external research projects, according to the handover presentation, alongside seed grant initiatives supporting staff and students.
The seed grant programme has supported 56 staff projects and 48 student projects, with the projects continuing.
Nabende encouraged the college to continue nurturing such initiatives so that smaller research projects can develop into larger programmes with greater impact.
Budget and financial position
The handover report also outlined the college’s budget position for the first quarter.
Nabende said approximately Shs461.5 million had been released for the quarter and that roughly one-third had been utilised at the time of the handover.
He noted that most budget-related processes are now managed electronically, allowing administrators to monitor requests, expenditure and other financial information through the university system.
The incoming Principal was therefore handed responsibility for continuing implementation of the approved budget while working with relevant administrative offices.
Graduation and academic administration
Nabende said the College Academic Board had considered and recommended results for the 2025/2026 academic year, placing CoCIS in a good position ahead of the forthcoming graduation.
He, however, called for attention to student complaints and graduate examination processes to ensure that more students are cleared for graduation.
He also outlined the work of various college committees, including the Establishments and Appointments Committee, Finance Committee, College Academic Board, Quality Assurance Committee, Appeals and Academic Policies Committee and Contracts Committee.
Despite leaving the Principal’s office, Nabende said he would remain available to support the new Principal in his capacity as Deputy Principal and academic staff member.
He thanked the university leadership, fellow principals, deans, heads of departments, academic and administrative staff and students for supporting him during his brief tenure.
Nabende also praised Prof. Oyana for steering the college before his tenure and expressed gratitude for the opportunity to serve as Acting Principal.
“I’m really, really happy that I was given the opportunity to act as a principal,” he said, describing the experience as an important opportunity for him.
He told Bainomugisha that he would continue to support the college and university’s strategic direction.
Internal Audit calls for a smooth transition
Representing the Office of the Chief Internal Auditor, Aggrey Luwuliza commended Nabende for accepting to act as Principal and subsequently handing over the office.
Luwuliza said handover processes are important because they formally mark the transition from one office-holder to another and allow incoming leaders to understand the status of an institution.
He urged the outgoing and incoming principals to agree on the contents of the handover report and areas requiring follow-up so that the transition does not become a source of disagreement.
“We are here to support you,” Luwuliza said, stressing the importance of agreement between the two office-holders before the formal handover.
He also congratulated Bainomugisha for accepting the responsibility of leading the college and wished him success.
Students welcome new Principal
CoCIS student chairperson Jim Ainamani, a fourth-year Bachelor of Software Engineering student, congratulated Bainomugisha on his appointment and pledged students’ cooperation.
Ainamani said students’ experiences at the college are significantly influenced by its leadership and expressed optimism that the new Principal would continue the tradition of caring leadership.
“For the time I’ve been here, for the three and a half years, I have been able to witness caring principals, from Professor Tony to our outgoing principal,” he said.
He said students hoped to work with Bainomugisha, learn from his leadership and benefit from an improved experience at the college.
Staff pledge cooperation
Dr. Swaibu Kyanda Kaawaase, Head of the Networks Department, delivered a vote of thanks on behalf of the college, welcoming Bainomugisha and pledging staff cooperation.
Kaawaase said staff expected positive developments under the new leadership and would work with the Principal to make CoCIS more innovative and globally recognised.
He also highlighted staff welfare and student experience as areas where cooperation would be important.
“We pledge cooperation in all aspects to ensure that our college can be the one that can be talked about in the rest of the globe as being very innovative,” he said.
He further pledged cooperation to ensure students receive the best possible education and staff welfare is strengthened.
A new chapter for CoCIS
The transition comes at a time when CoCIS is expanding its academic programmes, research and innovation portfolio while simultaneously confronting staffing constraints, programme accreditation and review requirements, rising student numbers and staff attrition.
Bainomugisha begins his tenure with a detailed handover outlining both the achievements and pressure points facing the college.
Rather than promising an immediate solution to every challenge, he called for a collaborative approach focused on addressing issues progressively.
He also reaffirmed that the Principal and Deputy Principal would work closely together, maintaining continuity in the leadership of the college.
“As we are just starting off, what I’m praying for is for God to give us wisdom and good life, and teamwork,” Bainomugisha said. “I look forward to working with you all.”
The handover formally closes Nabende’s brief stint as Acting Principal while marking the beginning of Bainomugisha’s tenure, with the new Principal expected to steer CoCIS through the next phase of academic, research, innovation and institutional development.
Who is Engineer Bainomugisha?
Note: Name Origin: “Engineer” is his actual first name, given by his parents who noticed his childhood curiosity about how things work.
Engineer Bainomugisha is Professor of Computer Science and the former Chair of the Department of Computer Science at Makerere University. His research focuses on Computer Science-driven solutions to the prevailing world challenges. He is also passionate about contributing to quality Computer Science education that is of sufficient breath and depth, practical and fast enough. Professor Bainomugisha currently leads several innovative initiatives that aim to create and apply computational methods and tools that can improve the quality of life especially in the developing world setting.
His current research projects include building networks of miniature devices to: measure and derive trends of air quality in over 50 urban centers in Uganda to tackle the growing air pollution challenge in developing countries; monitor soil conditions to help farms make smart decisions; measure the quality of road infrastructure in Uganda to help municipalities and road users. Professor Bainomugisha and his team are also building a multi-cloud solution that supports portability of apps and services between private and public clouds while taking into account unique African realities like bandwidth constraints, Internet and power outages. Previously
Professor Bainomugisha investigated and developed programming languages and software tools to help programmers easily write highly adaptive mobile software without worrying about low-level concerns. His research in this area helped create iScheme and Flute programming languages. He is also the Principal Investigator for several research projects including “Probabilistic low-cost air pollution monitoring”; “Centre for Data Technology”; “Build Research Capacity for Innovative ICT4D”; and “African Virtual Cloud Initiative”;
Professor Bainomugisha received a Ph.D. and MSc. in Computer Science from Vrije Universiteit Brussel, Belgium in 2008 & 2012, respectively; and a B.Sc. in Computer Science from Makerere University in 2006. Prior to returning to Makerere University he worked as a pre-doctoral and postdoctoral researcher at the Software Languages Lab, Vrije Universiteit Brussel, Belgium.
Jane Anyango is the Principal Communication Officer CoCIS
Photo Credits: Peninah Nalubega 4th year Journalism and Communication student
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